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Thread: Post Gedrosia 11 - Kalash Results

  1. #1
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    Post Post Gedrosia 11 - Kalash Results

    Kalash Calculator

    The Kalash Indo_European peoples of Pakistan are one of the world's most genetically and culturally isolated ethnic groups. Their ancient non-islamic Rigvedic type religion, combined with their physical isolation in the Hindu Kush mountains, have contributed to maintaining their relatively 'unmixed' gene pool for the past several thousand years.

    Genetically, they appear to be an early Indo-European offshoot, and according to tests that I have conducted using ADMIXTURE, they appear to be approximately 60% Caucasus derived, and 40% S Asian derived, and seem to lack the Caucasus derived Gedrosian signal, indicating that their Caucasus derived admixture pre-dates the differentiation of the Caucasus into Caucasus vs. Gedrosian component.

    With more formal statistical tests that tend to ignore recent genetic drift that I have performed, they appear to be genetically close to NE European and Caucasus populations.

    This calculator is most accurate for individuals with predominantly S Asian or W Asian Ancestry. It is least accurate for individuals with predominantly African or Native American ancestry. Since I have not used African populations to source allele frequencies, Africans will appear predominantly SW Asian.

    The calculator's stongest points are the Gedrosian and Kalash signals, although the Kalash shared ancestry percentage obtained here will tend to be an underestimate, as the calculator does not account for the Kalash recent genetic drift.

    This calculator's 11 components peak as follows:

    1- WHG (W European Hunter Gatherer) - Loushbour & NE Europeans
    2- S Indian - Various S Indian tribal populations, such as Hakkipikki and Nihali
    3- Gedrosian - The Baloch, Brahui, and Makrani of Pakistan
    4- SW_Asian - Saudis, Yemenis, and Bedouin
    5- Siberian - Nganasans
    6- EEF ( Early European Farmers) - LBK, Sardinians, and Stuttgart
    7- E Asian - Ulchis
    8- Caucasus - Georgian, Abkhasians, Adygei, and Balkar
    9- Kalash - Kalash of Pakistan
    10- Indo-Chinese - Kusunda peoples
    11- SE Asian - Ami & Dai.


    [IMG][/IMG]


    Population
    Gedrosian 41.81%
    Caucasus 19.15%
    S_Indian 16.09%
    WHG 6.56%
    Kalash 6.08%
    SW_Asian 2.82%
    SE_Asian 2.29%
    Siberian 1.74%
    E_Asian 1.70%
    EEF 1.04%
    Indo_Chinese 0.72%
    Last edited by Kurd; 09-03-2015 at 08:36 PM.

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  3. #2
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    Hope you don't mind us European types sharing our results...

    # Population Percent
    1 WHG 39.12
    2 EEF 25.57
    3 Caucasus 25.11
    4 S_Indian 3.82
    5 SW_Asian 3.31
    6 Kalash 1.4
    7 Gedrosian 1.13
    8 Indo_Chinese 0.49
    9 Siberian 0.04


    ------------------------------*--

    Least-squares method.

    Using 1 population approximation:
    1 Bulgarian @ 7.844730
    2 French @ 9.213015
    3 Albanian @ 18.051142
    4 Norwegian @ 19.579332
    5 Greek @ 20.400482
    6 French_South @ 24.683897
    7 Sicilian @ 27.711409
    8 Ashkenazi_Jew @ 28.869379
    9 Russian @ 33.545521
    10 Turkish @ 36.131626
    11 Finnish @ 37.412476
    12 Tajik_Pomiri @ 38.870239
    13 Turkmen @ 39.642010
    14 Estonian @ 39.842644
    15 Turkmen_Afghan @ 40.422874
    16 Lithuanian @ 41.009251
    17 Uzbek @ 41.213963
    18 Tajik_Afghan @ 42.915787
    19 Cypriot @ 43.537193
    20 Uzbek_Afghan @ 45.230755

    Using 2 populations approximation:
    1 50% Greek +50% Norwegian @ 4.143405


    Using 3 populations approximation:
    1 50% Bulgarian +25% Bulgarian +25% Norwegian @ 3.927316


    Using 4 populations approximation:
    1 Bulgarian + French_South + Lithuanian + Turkish @ 3.869150
    2 Bulgarian + Bulgarian + Bulgarian + Norwegian @ 3.927316
    3 Albanian + Greek + Norwegian + Norwegian @ 3.930419
    4 Bulgarian + Estonian + French_South + Turkish @ 3.990783
    5 Albanian + Finnish + French + Greek @ 4.004320
    6 Armenian + French + French_South + Lithuanian @ 4.046819
    7 Albanian + Albanian + French + Russian @ 4.054931
    8 Armenian + Estonian + French + French_South @ 4.110442
    9 Albanian + French + Greek + Russian @ 4.133211
    10 Finnish + French + Greek + Greek @ 4.136104
    11 Greek + Greek + Norwegian + Norwegian @ 4.143405
    12 Bulgarian + French + Greek + Norwegian @ 4.166831
    13 French + French + Norwegian + Turkish @ 4.167321
    14 Albanian + Estonian + French + Greek @ 4.206447
    15 French + French_South + Lithuanian + Turkish @ 4.233471
    16 French + French_South + Georgian_Jew + Lithuanian @ 4.240548
    17 Estonian + French + Greek + Greek @ 4.252822
    18 Albanian + Albanian + Norwegian + Norwegian @ 4.271728
    19 French_South + Norwegian + Norwegian + Turkish @ 4.278797
    20 Albanian + Albanian + Bulgarian + Estonian @ 4.289228
    Last edited by SwampThing27; 09-04-2015 at 04:47 AM.
    Known ancestry: English, French, German, Dutch

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  5. #3
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    1 Caucasus 50.82
    2 EEF 22.16
    3 SW_Asian 15.06
    4 Gedrosian 7.62
    5 WHG 2.90
    6 Kalash 1.44

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  7. #4
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    Quote Originally Posted by SwampThing27 View Post
    Hope you don't mind us European types sharing our results...

    # Population Percent
    1 WHG 39.12
    2 EEF 25.57
    3 Caucasus 25.11
    4 S_Indian 3.82
    5 SW_Asian 3.31
    6 Kalash 1.4
    7 Gedrosian 1.13
    8 Indo_Chinese 0.49
    9 Siberian 0.04
    Not at all. In fact it should be more accurate than the K12 for Europeans

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  9. #5
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    Population
    WHG 6.44%
    S_Indian 50.89%
    Gedrosian 24.60%
    SW_Asian -
    Siberian 1.20%
    EEF 2.51%
    E_Asian 0.11%
    Caucasus 5.50%
    Kalash 5.21%
    Indo_Chinese 2.11%
    SE_Asian 1.43%

     
    Using 1 population approximation:
    1 Punjabi @ 9.224517
    2 GujaratiB @ 9.766709
    3 GujaratiA @ 13.595462
    4 UP_Brahmin @ 14.647060
    5 GujaratiC @ 14.919256
    6 Sindhi @ 20.636198
    7 GujaratiD @ 20.778681
    8 Tharu @ 21.286503
    9 UP_Muslim @ 23.343487
    10 UP_Kol @ 23.523178
    11 Velamas @ 23.557659
    12 Kanjar @ 24.892717
    13 Gond @ 28.101873
    14 Kurumba @ 28.608370
    15 Burusho @ 28.806763
    16 Pathan @ 29.903475
    17 UP_Caste @ 29.918732
    18 Piramalai @ 31.309639
    19 AP_Chenchu @ 35.793030
    20 UP_Chamar @ 36.380009

    # Primary Population (source) Secondary Population (source) Distance
    1 90.5% Punjabi + 9.5% Brahui @ 5.02
    2 73% UP_Kol + 27% Balochi @ 5.09
    3 77.8% Tharu + 22.2% Brahui @ 5.15
    4 75.1% Tharu + 24.9% Balochi @ 5.21
    5 75.9% UP_Kol + 24.1% Brahui @ 5.29
    6 89.7% Punjabi + 10.3% Balochi @ 5.49
    7 67.9% UP_Caste + 32.1% Balochi @ 5.53
    8 90.1% Punjabi + 9.9% Makrani @ 5.55
    9 76.2% UP_Muslim + 23.8% Brahui @ 5.62
    10 74.9% Kanjar + 25.1% Brahui @ 5.64

    Using 2 populations approximation:
    1 50% Hakkipikki +50% Kurd_SE @ 6.839334


    Using 3 populations approximation:
    1 50% AP_Chenchu +25% Balochi +25% GujaratiA @ 4.994145


    Using 4 populations approximation:
    1 Brahui + UP_Brahmin + UP_Caste + UP_Caste @ 3.870821
    2 Brahui + Gond + UP_Brahmin + UP_Caste @ 4.015163
    3 Balochi + Gond + UP_Brahmin + UP_Caste @ 4.110607
    4 Balochi + Gond + GujaratiA + UP_Chamar @ 4.119450
    5 Balochi + GujaratiA + UP_Caste + UP_Chamar @ 4.120626
    6 Balochi + GujaratiA + Nihali + UP_Caste @ 4.141910
    7 Brahui + Gond + UP_Brahmin + UP_Chamar @ 4.260592
    8 Balochi + Gond + GujaratiB + UP_Caste @ 4.281644
    9 Balochi + Gond + GujaratiA + Hakkipikki @ 4.304531
    10 Balochi + UP_Brahmin + UP_Caste + UP_Kol @ 4.310067

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    # Population Percent
    1 S_Indian 27.56
    2 Caucasus 23.4
    3 Gedrosian 22.31
    4 WHG 11.31
    5 Kalash 5.74
    6 EEF 3.88
    7 Indo_Chinese 1.69
    8 Siberian 1.53
    9 E_Asian 0.97
    10 SW_Asian 0.96
    11 SE_Asian 0.65

    Single Population Sharing:

    # Population (source) Distance
    1 Pathan 6.84
    2 Burusho 6.99
    3 Pashtun_Afghan 14.83
    4 Sindhi 14.84
    5 GujaratiA 16.48
    6 Tajik_Afghan 18.77
    7 Uzbek_Afghan 19.74
    8 Tajik_Pomiri 19.91
    9 Kurd_SE 21.4
    10 GujaratiB 24.18
    11 Hazara_Afghan 24.93
    12 UP_Brahmin 26.2
    13 Punjabi 28.43
    14 Turkmen_Afghan 29.94
    15 Turkmen 30.11
    16 Uzbek 31.61
    17 Iranian 31.91
    18 GujaratiC 33.34
    19 Kurd_C 35.82
    20 Hazara 36.85

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    1 Caucasus 36.78
    2 EEF 19.24
    3 SW_Asian 12.67
    4 Gedrosian 11.04
    5 WHG 6.09
    6 E_Asian 4.28
    7 Siberian 3.00
    8 Kalash 2.66
    9 S_Indian 2.11
    10 Indo_Chinese 1.54

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  15. #8
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    Admix Results (sorted):

    # Population Percent
    1 Gedrosian 38.44
    2 S_Indian 31.02
    3 Caucasus 13.53
    4 WHG 11.07
    5 Kalash 2.56
    6 E_Asian 2.1
    7 Indo_Chinese 0.72
    8 Siberian 0.56

    Single Population Sharing:

    # Population (source) Distance
    1 Sindhi 9.02
    2 Pathan 13.56
    3 GujaratiA 16.34
    4 Kurd_SE 16.37
    5 Burusho 19.79
    6 Pashtun_Afghan 25.15
    7 GujaratiB 25.21
    8 Uzbek_Afghan 27.28
    9 Punjabi 28.42
    10 UP_Brahmin 29.41
    11 Tajik_Pomiri 30.37
    12 Tajik_Afghan 30.53
    13 Hazara_Afghan 33.36
    14 GujaratiC 33.98
    15 Balochi 35.95
    16 Makrani 38.78
    17 Turkmen_Afghan 39.32
    18 GujaratiD 40.56
    19 Turkmen 40.77
    20 Tharu 41.12

    Mixed Mode Population Sharing:

    # Primary Population (source) Secondary Population (source) Distance
    1 69.4% GujaratiA + 30.6% Balochi @ 4.54
    2 74.8% GujaratiA + 25.2% Brahui @ 5.3
    3 55.1% UP_Brahmin + 44.9% Balochi @ 5.33
    4 71.5% GujaratiA + 28.5% Makrani @ 5.79
    5 87.3% Sindhi + 12.7% Brahui @ 6.09
    6 84.3% Sindhi + 15.7% Balochi @ 6.15
    7 85.9% Sindhi + 14.1% Makrani @ 6.49
    8 61.5% UP_Brahmin + 38.5% Brahui @ 6.81
    9 59.3% GujaratiB + 40.7% Balochi @ 6.88
    10 72.7% Sindhi + 27.3% Kurd_SE @ 7.11
    11 57.2% UP_Brahmin + 42.8% Makrani @ 7.21
    12 50.1% GujaratiA + 49.9% Kurd_SE @ 7.49
    13 95.5% Sindhi + 4.5% Loschbour @ 7.74
    14 65.5% Kurd_SE + 34.5% Punjabi @ 7.77
    15 62.6% Kurd_SE + 37.4% GujaratiB @ 8.01
    16 75.2% Kurd_SE + 24.8% Kanjar @ 8.03
    17 75% Kurd_SE + 25% UP_Kol @ 8.13
    18 94.9% Sindhi + 5.1% Estonian @ 8.14
    19 69.9% Kurd_SE + 30.1% GujaratiC @ 8.15
    20 61.4% GujaratiB + 38.6% Makrani @ 8.17
    pegasus modeling:
    sample": "Punjabi_Jat:Sapporo_AGUser",
    "fit": 1.1506,
    "IRN_Shahr_I_Sokhta_BA3": 43.33,
    "TKM_Gonur1_BA": 31.67,
    "RUS_Sintashta_MLBA": 25,
    "closestDistances": [

    avatar credit goes out to aaronbee2010

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    1 WHG 23.29
    2 Caucasus 22.17
    3 E_Asian 14.83
    4 EEF 12.87
    5 Gedrosian 7.65
    6 SE_Asian 6.91
    7 SW_Asian 4.61
    8 Siberian 3.52
    9 S_Indian 1.93
    10 Indo_Chinese 1.77
    11 Kalash 0.44

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  19. #10
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    # Population Percent
    1 S_Indian 52.44
    2 Gedrosian 21.9
    3 Caucasus 9.73
    4 WHG 4.76
    5 Kalash 4.55
    6 Indo_Chinese 1.58
    7 SE_Asian 1.32
    8 E_Asian 1.29
    9 SW_Asian 1.14
    10 Siberian 0.8
    11 EEF 0.48

    Single Population Sharing:

    # Population (source) Distance
    1 Punjabi 4.7
    2 GujaratiB 5.67
    3 GujaratiC 9.63
    4 UP_Brahmin 10.55
    5 GujaratiA 12.8
    6 GujaratiD 15.84
    7 Tharu 16.3
    8 UP_Muslim 17.65
    9 UP_Kol 18.55
    10 Velamas 18.67
    11 Sindhi 18.97
    12 Kanjar 19.52
    13 Gond 23.29
    14 Kurumba 23.48
    15 UP_Caste 24.48
    16 Burusho 25.09
    17 Piramalai 26.2
    18 Pathan 26.66
    19 AP_Chenchu 29.98
    20 UP_Chamar 30.46

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