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Thread: ADMIXTURE test using 350K markers

  1. #131
    Gold Class Member
    Posts
    591
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    Assamese
    Nationality
    Indian
    Y-DNA
    R1a1
    mtDNA
    M13'46'61

    India China Tajikistan Mongolia Russian Federation Papua New Guinea
    Ancestry DNA converted to 23andMe

    25.01% Pashtun
    1.65% SE_European
    0.61% SSA
    3.01% NE_European
    41.21% Indian
    15.92% Mongol
    3.39% Papuan
    2.87% NE_Asian
    1.59% SW_Asian
    4.73% Turkic

  2. #132
    Gold Class Member
    Posts
    591
    Sex
    Ethnicity
    Assamese
    Nationality
    Indian
    Y-DNA
    R1a1
    mtDNA
    M13'46'61

    India China Tajikistan Mongolia Russian Federation Papua New Guinea
    Ancestry DNA converted to 23andMe, Pashtuk K13 results

    FINAL ADMIXTURE PROPORTIONS:
    ----------------------------

    22.62% Pashtun
    1.21% SE_European
    5.72% Brunei
    8.97% Burmese
    3.09% NE_European
    3.17% NW_European
    37.39% Indian
    0.37% SSA
    7.92% Mongolian
    2.38% Papuan
    1.49% NE_Asian
    2.28% Near_Eastern
    3.39% Turkic

    CPU time = 363.61 sec

    Population data has been read. 123 populations found.
    Personal data has been read. 20 approximations mode.
    Person: Test1
    Threshold of components set to 0.43%


    Least-squares method.

    Using 1 population approximation:
    1 Nepali_Brahmin @ 20.413901
    2 Kshatriya @ 24.998572
    3 Brahmin @ 25.220544
    4 Ust_Ishim @ 34.492061
    5 Tajiks @ 35.841676
    6 Punjab @ 38.422351
    7 India_Marwadi @ 39.885892
    8 Bengali @ 41.236417
    9 Tajik @ 41.726253
    10 India_Orissa @ 41.896448
    11 Tajik_Ishkasim @ 43.306206
    12 India_Gupta @ 44.162799
    13 Bengali_Dhaka @ 44.389504
    14 Indian_Balija @ 45.238005
    15 Uygurs @ 46.388959
    16 Tajik_Yaghnobi @ 49.853951
    17 Russia_Balkar @ 50.578172
    18 North-Ossetians @ 50.743228
    19 Russia_Kabardins @ 50.794293
    20 Circassians @ 51.286538
    123 iterations.

    Using 2 populations approximation:
    1 India_Gond+Tajik @ 10.911536
    2 Bengali_Dhaka+Tajiks @ 11.179238
    3 Bengali_Dhaka+Tajik @ 11.217359
    4 India_Santhal+Tajik @ 11.431248
    5 India_Asur+Tajik @ 11.632399
    6 India_Orissa+Tajiks @ 12.27013
    7 India_Gond+Tajik_Yaghnobi @ 12.380891
    8 India_Santhal+Tajik_Yaghnobi @ 12.652142
    9 Malayan+Tajik @ 12.661483
    10 India_Asur+Tajik_Yaghnobi @ 12.81844
    11 India_Gond+Tajiks @ 13.047187
    12 Bengali_Dhaka+Tajik_Yaghnobi @ 13.240006
    13 India_Mpradesh+Tajik @ 13.356919
    14 Malayan+Tajik_Yaghnobi @ 13.681271
    15 India_Santhal+Tajiks @ 14.040404
    16 India_Orissa+Tajik @ 14.05513
    17 India_Asur+Tajiks @ 14.139444
    18 India_Mpradesh+Tajik_Yaghnobi @ 14.326233
    19 Bengali+Tajiks @ 14.366955
    20 Malayan+Tajiks @ 15.098075
    7626 iterations.

    Using 3 populations approximation:
    1 50% Kshatriya +25% Ust_Ishim +25% Uygurs @ 6.824064
    2 50% Brahmin +25% Ust_Ishim +25% Uygurs @ 7.07011
    3 50% Punjab +25% Tajiks +25% Vietnamese_central @ 7.738838
    4 50% Bengali +25% Tajik +25% Vietnamese_central @ 7.8116
    5 50% India_Orissa +25% Tajik_Rushan +25% Vietnamese_central @ 7.856212
    6 50% India_Marwadi +25% Tajik +25% Vietnamese_central @ 7.868493
    7 50% India_Marwadi +25% Tajiks +25% Vietnamese_central @ 7.877625
    8 50% Punjab +25% Tajiks +25% Vietnamese_north @ 7.917327
    9 50% Bengali +25% Tajik_Yaghnobi +25% Vietnamese_central @ 7.945765
    10 50% Punjab +25% Tajik +25% Vietnamese_central @ 8.026686
    11 50% India_Marwadi +25% Tajiks +25% Vietnamese_north @ 8.053038
    12 50% Punjab +25% Tajiks +25% Vietnamese_south @ 8.128025
    13 50% India_Orissa +25% Tajik_Rushan +25% Vietnamese_north @ 8.197475
    14 50% Bengali +25% Tajik +25% Vietnamese_north @ 8.205097
    15 50% India_Marwadi +25% Tajiks +25% Vietnamese_south @ 8.260276
    16 50% India_Marwadi +25% Tajik +25% Vietnamese_north @ 8.266512
    17 50% Bengali +25% Tajik_Yaghnobi +25% Vietnamese_north @ 8.315506
    18 50% Bengali +25% Tajik +25% Vietnamese_south @ 8.319171
    19 50% Nepali_Brahmin +25% Ust_Ishim +25% Uygurs @ 8.320552
    20 50% India_Orissa +25% Tajik_Yaghnobi +25% Vietnamese_central @ 8.328523
    432001 iterations.

    Using 4 populations approximation:
    1 India_Mpradesh+Kalash+Ust_Ishim+Uygurs @ 5.450186
    2 India_Gond+Kalash+Ust_Ishim+Uygurs @ 5.484784
    3 India_Asur+Kalash+Ust_Ishim+Uygurs @ 5.541026
    4 India_Santhal+Kalash+Ust_Ishim+Uygurs @ 5.55756
    5 Kalash+Malayan+Ust_Ishim+Uygurs @ 5.948047
    6 Bengali_Dhaka+Kalash+Ust_Ishim+Uygurs @ 6.690451
    7 Brahmin+Kshatriya+Ust_Ishim+Uygurs @ 6.700714
    8 Kshatriya+Kshatriya+Ust_Ishim+Uygurs @ 6.824064
    9 India_Ho+Kalash+Ust_Ishim+Uygurs @ 6.87295
    10 India_Kapu+Kalash+Ust_Ishim+Uygurs @ 6.87295
    11 India_Kol+Kalash+Ust_Ishim+Uygurs @ 6.87295
    12 India_Kurmi+Kalash+Ust_Ishim+Uygurs @ 6.87295
    13 India_Thakur+Kalash+Ust_Ishim+Uygurs @ 6.87295
    14 Brahmin+Nepali_Brahmin+Ust_Ishim+Uygurs @ 7.018012
    15 Brahmin+Brahmin+Ust_Ishim+Uygurs @ 7.07011
    16 Brahmin+India_Santhal+Tajiks+Uygurs @ 7.332041
    17 India_Ho+Tajik_Rushan+Ust_Ishim+Uygurs @ 7.335178
    18 India_Kapu+Tajik_Rushan+Ust_Ishim+Uygurs @ 7.335178
    19 India_Kol+Tajik_Rushan+Ust_Ishim+Uygurs @ 7.335178
    20 India_Kurmi+Tajik_Rushan+Ust_Ishim+Uygurs @ 7.335178
    21 India_Thakur+Tajik_Rushan+Ust_Ishim+Uygurs @ 7.335178
    22 Brahui+India_Mpradesh+Ust_Ishim+Uygurs @ 7.368906
    23 Kshatriya+Nepali_Brahmin+Ust_Ishim+Uygurs @ 7.37385
    24 Balochi+India_Mpradesh+Ust_Ishim+Uygurs @ 7.38247
    25 Brahmin+India_Asur+Tajiks+Uygurs @ 7.423702
    26 India_Santhal+Kshatriya+Tajiks+Uygurs @ 7.509208
    27 Brahmin+Punjab+Ust_Ishim+Uygurs @ 7.514581
    28 Brahmin+India_Gond+Tajiks+Uygurs @ 7.520582
    29 Brahui+India_Asur+Ust_Ishim+Uygurs @ 7.556108
    30 India_Gond+Kshatriya+Nepal_Tamang+Tajik_Rushan @ 7.575227
    31 Brahui+India_Santhal+Ust_Ishim+Uygurs @ 7.58102
    32 Brahmin+Malayan+Tajik+Vietnamese_central @ 7.594741
    33 India_Asur+Kshatriya+Tajiks+Uygurs @ 7.600561
    34 Balochi+India_Asur+Ust_Ishim+Uygurs @ 7.603941
    35 Kshatriya+Punjab+Ust_Ishim+Uygurs @ 7.617502
    36 Kshatriya+Malayan+Tajik_Ishkasim+Vietnamese_centra l @ 7.618492
    37 Indian_Balija+Kshatriya+Tajiks+Vietnamese_central @ 7.619902
    38 Balochi+India_Santhal+Ust_Ishim+Uygurs @ 7.637387
    39 India_Santhal+Nepali_Brahmin+Tajiks+Uygurs @ 7.641028
    40 Brahui+India_Gond+Ust_Ishim+Uygurs @ 7.643478
    1505657 iterations.


    Gaussian method.
    Noise dispersion set to 0.384776

    Using 1 population approximation:
    1 Bengali_Dhaka @ 29.659301
    2 Tajik @ 32.137048
    3 Nepali_Brahmin @ 32.85993
    4 India_Orissa @ 33.526738
    5 Tajiks @ 33.877551
    6 Bengali @ 42.429094
    7 Uygurs @ 48.54489
    8 Tajik_Ishkasim @ 50.73919
    9 Kalash @ 53.352261
    10 Brahmin @ 56.769443
    11 Tajik_Shugnan @ 56.810791
    12 Kshatriya @ 58.129881
    13 Iranians @ 61.311886
    14 Tajik_Rushan @ 61.492528
    15 Tajik_Yaghnobi @ 62.176605
    16 Punjab @ 62.379074
    17 India_Marwadi @ 62.627156
    18 India_Gupta @ 62.907708
    19 Indian_Balija @ 63.313056
    20 Brahui @ 64.79788
    123 iterations.

    Using 2 populations approximation:
    1 India_Gond+Tajik @ 7.795972
    2 India_Asur+Tajik @ 8.934369
    3 India_Santhal+Tajik @ 9.40283
    4 India_Mpradesh+Tajik @ 10.284905
    5 Malayan+Uygurs @ 12.04992
    6 India_Asur+Uygurs @ 12.374929
    7 India_Gond+Uygurs @ 12.547108
    8 Bengali_Dhaka+Tajiks @ 12.632354
    9 India_Santhal+Uygurs @ 12.693995
    10 India_Gond+Tajiks @ 13.035128
    11 India_Mpradesh+Uygurs @ 13.445976
    12 Bengali_Dhaka+Tajik @ 13.730982
    13 India_Asur+Tajiks @ 14.585015
    14 India_Mpradesh+Tajiks @ 14.991815
    15 India_Santhal+Tajiks @ 15.129085
    16 India_Gond+Russia_Balkar @ 15.268959
    17 India_Orissa+Tajiks @ 15.313542
    18 Malayan+Tajik @ 15.564708
    19 India_Asur+Russia_Balkar @ 15.906832
    20 Bengali_Dhaka+Tajik_Yaghnobi @ 16.212559
    7626 iterations.

    Using 3 populations approximation:
    1 50% India_Orissa +25% Tajiks +25% Vietnamese_central @ 6.827315
    2 50% India_Orissa +25% Tajiks +25% Vietnamese_north @ 6.869409
    3 50% India_Orissa +25% Tajik +25% Vietnamese_central @ 6.881746
    4 50% India_Orissa +25% Tajiks +25% Vietnamese_south @ 6.923152
    5 50% India_Orissa +25% Tajik +25% Vietnamese_north @ 7.016058
    6 50% India_Orissa +25% Tajik +25% Vietnamese_south @ 7.034506
    7 50% India_Gond +25% Pashtun_Afghan +25% Uygurs @ 7.058317
    8 50% India_Asur +25% Pashtun_Afghan +25% Uygurs @ 7.200058
    9 50% India_Gond +25% Tajik_Rushan +25% Uygurs @ 7.239059
    10 50% India_Asur +25% Tajik_Rushan +25% Uygurs @ 7.375972
    11 50% Malayan +25% Pashtun_Afghan +25% Uygurs @ 7.458365
    12 50% India_Gond +25% Pashtun_Afghan +25% Russia_Kazakhs @ 7.587557
    13 50% India_Gond +25% Kalash +25% Uygurs @ 7.593597
    14 50% Malayan +25% Tajik_Rushan +25% Uygurs @ 7.618555
    15 50% Punjab +25% Philippines_Batak +25% Uygurs @ 7.705923
    16 50% India_Asur +25% Tajik_Shugnan +25% Uygurs @ 7.708105
    17 50% India_Gond +25% Tajiks +25% Uygurs @ 7.727727
    18 50% Tajik +25% India_Gond +25% India_Santhal @ 7.746842
    19 50% India_Gond +25% Balochi +25% Russia_Kazakhs @ 7.79259
    20 50% India_Gond +25% Tajik +25% Tajik @ 7.795972
    930372 iterations.

    Using 4 populations approximation:
    1 India_Gond+India_Santhal+Pashtun_Afghan+Uygurs @ 6.40677
    2 Brahmin+India_Gond+Tajik+Vietnamese_central @ 6.508719
    3 India_Asur+India_Gond+Pashtun_Afghan+Uygurs @ 6.51317
    4 Brahmin+India_Gond+Tajik+Vietnamese_north @ 6.579219
    5 Brahmin+Malayan+Tajik+Vietnamese_central @ 6.584909
    6 India_Gond+India_Santhal+Tajik_Rushan+Uygurs @ 6.606792
    7 Brahmin+Malayan+Tajik+Vietnamese_north @ 6.620334
    8 Brahmin+India_Gond+Tajik+Vietnamese_south @ 6.636069
    9 India_Gond+Malayan+Pashtun_Afghan+Uygurs @ 6.675978
    10 Brahmin+Malayan+Tajik+Vietnamese_south @ 6.677221
    11 Brahmin+India_Gond+Tajiks+Vietnamese_north @ 6.701235
    12 India_Asur+India_Gond+Tajik_Rushan+Uygurs @ 6.709809
    13 Brahmin+India_Gond+Tajiks+Vietnamese_central @ 6.749856
    14 India_Gond+Kshatriya+Tajik+Vietnamese_central @ 6.771224
    15 Brahmin+India_Marwadi+Philippines_Batak+Uygurs @ 6.787303
    16 Brahmin+Philippines_Batak+Punjab+Uygurs @ 6.814061
    17 Brahmin+India_Gond+Tajiks+Vietnamese_south @ 6.818145
    18 Brahmin+Indian_Balija+Philippines_Batak+Uygurs @ 6.822975
    19 India_Orissa+India_Orissa+Tajiks+Vietnamese_centra l @ 6.827315
    20 India_Gond+Kshatriya+Tajiks+Vietnamese_north @ 6.835416
    21 Brahmin+India_Gupta+Philippines_Batak+Uygurs @ 6.838344
    22 India_Gond+Kshatriya+Tajik+Vietnamese_north @ 6.838749
    23 India_Gond+Malayan+Tajik_Rushan+Uygurs @ 6.865786
    24 India_Orissa+India_Orissa+Tajiks+Vietnamese_north @ 6.869409
    25 Brahmin+Malayan+Tajiks+Vietnamese_north @ 6.878215
    26 India_Orissa+India_Orissa+Tajik+Vietnamese_central @ 6.881746
    27 India_Gond+Kshatriya+Tajiks+Vietnamese_central @ 6.882996
    28 India_Gond+Kshatriya+Tajik+Vietnamese_south @ 6.893247
    29 Kshatriya+Malayan+Tajik+Vietnamese_central @ 6.901223
    30 Brahmin+India_Orissa+Tajiks+Vietnamese_central @ 6.919218
    31 India_Asur+Malayan+Pashtun_Afghan+Uygurs @ 6.919826
    32 India_Marwadi+Kshatriya+Philippines_Batak+Uygurs @ 6.923052
    33 India_Orissa+India_Orissa+Tajiks+Vietnamese_south @ 6.923152
    34 Kshatriya+Malayan+Tajik+Vietnamese_north @ 6.934874
    35 Kshatriya+Philippines_Batak+Punjab+Uygurs @ 6.939642
    36 Brahmin+India_Orissa+Tajiks+Vietnamese_north @ 6.945947
    37 India_Santhal+Malayan+Pashtun_Afghan+Uygurs @ 6.946359
    38 India_Gond+Kshatriya+Tajiks+Vietnamese_south @ 6.949849
    39 Brahmin+Malayan+Tajiks+Vietnamese_central @ 6.950875
    40 Bengali+Brahmin+Philippines_Batak+Uygurs @ 6.969184

  3. The Following User Says Thank You to jortita For This Useful Post:

     Kurd (10-09-2016)

  4. #133
    Senior Member
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    In the palace of Mombasa :P
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    Swahili from Mombasa
    Nationality
    Kenyan
    Y-DNA
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    mtDNA
    L3'4

    Kenya Tanzania United Kingdom Iran Oman African Union
    What's with the low SSA?


    3.10% Pashtun
    1.91% SE_European
    0.33% Brunei
    4.09% Burmese
    0.13% NE_European
    0.77% NW_European
    4.81% Indian
    66.67% SSA
    0.51% Mongolian
    1.26% Papuan
    0.86% NE_Asian
    15.56% Near_Eastern
    0.00% Turkic

  5. The Following 3 Users Say Thank You to SWAHILLI_PRINCE16 For This Useful Post:

     Deftextra (10-11-2016), jatt2016 (10-11-2016), Kurd (10-09-2016)

  6. #134
    Senior Member
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    Dutch
    Y-DNA
    E-V32>Z808

    Somalia Netherlands
    AncestryDNA converted to 23andMe

    (0.594276 genotype rate)

    15.42% Pashtun
    11.81% SE_European
    1.40% Brunei
    3.60% Burmese
    0.37% NE_European
    2.02% NW_European
    11.56% Indian
    27.79% SSA
    0.70% Mongolian
    1.16% Papuan
    0.02% NE_Asian
    22.76% Near_Eastern
    1.39% Turkic

    My SSA score is slightly lower than what I usually score (around 32%), but I think this is because of the low genotype rate and lots of snp's are missing?

  7. The Following 2 Users Say Thank You to Deftextra For This Useful Post:

     jatt2016 (10-11-2016), Kurd (10-11-2016)

  8. #135
    Senior Member
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    Y-DNA
    E-V32>Z808

    Somalia Netherlands
    Quote Originally Posted by SWAHILLI_PRINCE16 View Post
    What's with the low SSA?


    3.10% Pashtun
    1.91% SE_European
    0.33% Brunei
    4.09% Burmese
    0.13% NE_European
    0.77% NW_European
    4.81% Indian
    66.67% SSA
    0.51% Mongolian
    1.26% Papuan
    0.86% NE_Asian
    15.56% Near_Eastern
    0.00% Turkic
    Probably because SSA is based on Mbuti and Congo Pygmies.

  9. #136
    Senior Member
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    Y-DNA
    E-V32>Z808

    Somalia Netherlands
    I see there are only 2 African populations in the spreadsheet (mutbi&Congo pygymies).
    Gaussian
     


    Gaussian method.
    Noise dispersion set to 0.384776

    Using 1 population approximation:
    1 Jordanians @ 34.619312
    2 Arabs_Israel @ 43.229854
    3 Iranians @ 56.841289
    4 Ust_Ishim @ 73.625484
    5 Druze @ 81.049468
    6 Brahui @ 90.475471
    7 Tajiks @ 92.154878
    8 Tajik @ 97.87924
    9 Balochi @ 99.338756
    10 Macedonian @ 104.647111
    11 Tajik_Yaghnobi @ 104.927395
    12 Cossacks @ 105.301393
    13 Uygurs @ 106.079952
    14 Tatars @ 107.225046
    15 Moldavians @ 107.524763
    16 Bosnian @ 108.324166
    17 Kyrgyz @ 109.994016
    18 Circassians @ 110.670426
    19 Azerbaijanis @ 111.020834
    20 Assyrians @ 111.08056
    123 iterations.

    Using 2 populations approximation:
    1 Arabs_Israel+Ust_Ishim @ 20.060036
    2 Azerbaijanis+Ust_Ishim @ 20.205806
    3 Assyrians+Ust_Ishim @ 20.590379
    4 Druze+Ust_Ishim @ 20.648634
    5 Georgians+Ust_Ishim @ 20.98469
    6 Russia_Balkar+Ust_Ishim @ 21.044818
    7 North-Ossetians+Ust_Ishim @ 21.25915
    8 Circassians+Ust_Ishim @ 21.344093
    9 Russia_Kabardins+Ust_Ishim @ 21.542742
    10 Iran_Zoroastrian+Ust_Ishim @ 22.044657
    11 Lezgins+Ust_Ishim @ 22.442109
    12 Kumyks+Ust_Ishim @ 22.457209
    13 Jordanians+Ust_Ishim @ 22.795911
    14 Tajik_Yaghnobi+Ust_Ishim @ 23.655693
    15 Tajik+Ust_Ishim @ 23.754708
    16 Tajiks+Ust_Ishim @ 23.835809
    17 Congo-pygmies+Jordanians @ 24.469427
    18 Jordanians+Mbuti.DG @ 24.469427
    19 Tabasarans+Ust_Ishim @ 25.020509
    20 Ust_Ishim+Uygurs @ 25.72742
    7626 iterations.

    Using 3 populations approximation:
    1 50% Assyrians +25% Congo-pygmies +25% India_Asur @ 7.118813
    2 50% Assyrians +25% India_Asur +25% Mbuti.DG @ 7.118813
    3 50% Assyrians +25% Congo-pygmies +25% India_Gond @ 7.129864
    4 50% Assyrians +25% India_Gond +25% Mbuti.DG @ 7.129864
    5 50% Assyrians +25% Congo-pygmies +25% India_Santhal @ 7.281858
    6 50% Assyrians +25% India_Santhal +25% Mbuti.DG @ 7.281858
    7 50% Druze +25% Congo-pygmies +25% India_Asur @ 7.47675
    8 50% Druze +25% India_Asur +25% Mbuti.DG @ 7.47675
    9 50% Druze +25% Congo-pygmies +25% India_Santhal @ 7.547122
    10 50% Druze +25% India_Santhal +25% Mbuti.DG @ 7.547122
    11 50% Druze +25% Congo-pygmies +25% India_Gond @ 7.581144
    12 50% Druze +25% India_Gond +25% Mbuti.DG @ 7.581144
    13 50% Druze +25% Bengali_Dhaka +25% Congo-pygmies @ 7.592794
    14 50% Druze +25% Bengali_Dhaka +25% Mbuti.DG @ 7.592794
    15 50% Assyrians +25% Congo-pygmies +25% India_Mpradesh @ 7.627096
    16 50% Assyrians +25% India_Mpradesh +25% Mbuti.DG @ 7.627096
    17 50% Druze +25% Congo-pygmies +25% India_Mpradesh @ 7.812689
    18 50% Druze +25% India_Mpradesh +25% Mbuti.DG @ 7.812689
    19 50% Assyrians +25% Bengali_Dhaka +25% Congo-pygmies @ 7.965619
    20 50% Assyrians +25% Bengali_Dhaka +25% Mbuti.DG @ 7.965619
    930372 iterations.

    Using 4 populations approximation:
    1 Congo-pygmies+Druze+India_Asur+Iranians @ 6.254177
    2 Druze+India_Asur+Iranians+Mbuti.DG @ 6.254177
    3 Arabs_Israel+Congo-pygmies+India_Asur+Iranians @ 6.325965
    4 Arabs_Israel+India_Asur+Iranians+Mbuti.DG @ 6.325965
    5 Congo-pygmies+Druze+India_Santhal+Iranians @ 6.334354
    6 Druze+India_Santhal+Iranians+Mbuti.DG @ 6.334354
    7 Congo-pygmies+Druze+India_Gond+Iranians @ 6.378988
    8 Druze+India_Gond+Iranians+Mbuti.DG @ 6.378988
    9 Arabs_Israel+Congo-pygmies+India_Gond+Iranians @ 6.413076
    10 Arabs_Israel+India_Gond+Iranians+Mbuti.DG @ 6.413076
    11 Arabs_Israel+Congo-pygmies+India_Santhal+Iranians @ 6.437308
    12 Arabs_Israel+India_Santhal+Iranians+Mbuti.DG @ 6.437308
    13 Azerbaijanis+Congo-pygmies+Druze+India_Asur @ 6.45317
    14 Azerbaijanis+Druze+India_Asur+Mbuti.DG @ 6.45317
    15 Azerbaijanis+Congo-pygmies+Druze+Malayan @ 6.474232
    16 Azerbaijanis+Druze+Malayan+Mbuti.DG @ 6.474232
    17 Arabs_Israel+Azerbaijanis+Congo-pygmies+Malayan @ 6.522315
    18 Arabs_Israel+Azerbaijanis+Malayan+Mbuti.DG @ 6.522315
    19 Arabs_Israel+Congo-pygmies+India_Asur+Iran_Zoroastrian @ 6.551634
    20 Arabs_Israel+India_Asur+Iran_Zoroastrian+Mbuti.DG @ 6.551634
    21 Arabs_Israel+Azerbaijanis+Congo-pygmies+India_Asur @ 6.554085
    22 Arabs_Israel+Azerbaijanis+India_Asur+Mbuti.DG @ 6.554085
    23 Arabs_Israel+Congo-pygmies+India_Gond+Iran_Zoroastrian @ 6.577968
    24 Arabs_Israel+India_Gond+Iran_Zoroastrian+Mbuti.DG @ 6.577968
    25 Azerbaijanis+Congo-pygmies+Druze+India_Santhal @ 6.57825
    26 Azerbaijanis+Druze+India_Santhal+Mbuti.DG @ 6.57825
    27 Azerbaijanis+Congo-pygmies+Druze+India_Gond @ 6.585366
    28 Azerbaijanis+Druze+India_Gond+Mbuti.DG @ 6.585366
    29 Congo-pygmies+Druze+India_Asur+North-Ossetians @ 6.623449
    30 Druze+India_Asur+Mbuti.DG+North-Ossetians @ 6.623449
    31 Arabs_Israel+Azerbaijanis+Congo-pygmies+India_Gond @ 6.635826
    32 Arabs_Israel+Azerbaijanis+India_Gond+Mbuti.DG @ 6.635826
    33 Arabs_Israel+Congo-pygmies+India_Santhal+Iran_Zoroastrian @ 6.718253
    34 Arabs_Israel+India_Santhal+Iran_Zoroastrian+Mbuti. DG @ 6.718253
    35 Congo-pygmies+Druze+India_Santhal+North-Ossetians @ 6.718557
    36 Druze+India_Santhal+Mbuti.DG+North-Ossetians @ 6.718557
    37 Arabs_Israel+Azerbaijanis+Congo-pygmies+India_Santhal @ 6.72211
    38 Arabs_Israel+Azerbaijanis+India_Santhal+Mbuti.DG @ 6.72211
    39 Congo-pygmies+Druze+India_Gond+North-Ossetians @ 6.724493
    40 Druze+India_Gond+Mbuti.DG+North-Ossetians @ 6.724493
    10009125 iterations.


    Least-squares
     

    Least-squares method.

    Using 1 population approximation:
    1 Georgians @ 40.583062
    2 Azerbaijanis @ 40.756181
    3 Assyrians @ 41.070752
    4 Circassians @ 41.169043
    5 Russia_Kabardins @ 41.801302
    6 Russia_Balkar @ 41.807442
    7 North-Ossetians @ 41.928473
    8 Tajiks @ 43.512425
    9 Ust_Ishim @ 43.687782
    10 Druze @ 45.723861
    11 Arabs_Israel @ 47.297777
    12 Tajik @ 49.038674
    13 Kumyks @ 49.963124
    14 Iranians @ 50.372542
    15 Lezgins @ 51.990997
    16 Tajik_Yaghnobi @ 53.252302
    17 Iran_Zoroastrian @ 53.389781
    18 Uygurs @ 53.529668
    19 Tajik_Ishkasim @ 55.569838
    20 Jordanians @ 56.357371
    123 iterations.

    Using 2 populations approximation:
    1 Assyrians+Congo-pygmies @ 25.707773
    2 Assyrians+Mbuti.DG @ 25.707773
    3 Azerbaijanis+Ust_Ishim @ 26.6223
    4 Congo-pygmies+Druze @ 26.696883
    5 Druze+Mbuti.DG @ 26.696883
    6 Assyrians+Ust_Ishim @ 26.860127
    7 Georgians+Ust_Ishim @ 27.33931
    8 Azerbaijanis+Congo-pygmies @ 27.781413
    9 Azerbaijanis+Mbuti.DG @ 27.781413
    10 Congo-pygmies+Georgians @ 27.832331
    11 Georgians+Mbuti.DG @ 27.832331
    12 Circassians+Ust_Ishim @ 28.326942
    13 Arabs_Israel+Congo-pygmies @ 28.380974
    14 Arabs_Israel+Mbuti.DG @ 28.380974
    15 North-Ossetians+Ust_Ishim @ 28.519735
    16 Druze+Ust_Ishim @ 28.601005
    17 Russia_Kabardins+Ust_Ishim @ 28.603607
    18 Russia_Balkar+Ust_Ishim @ 28.858828
    19 Arabs_Israel+Ust_Ishim @ 29.530169
    20 Iran_Zoroastrian+Ust_Ishim @ 29.902526
    7626 iterations.

    Using 3 populations approximation:
    1 50% Druze +25% Congo-pygmies +25% Nepali_Brahmin @ 6.774635
    2 50% Druze +25% Mbuti.DG +25% Nepali_Brahmin @ 6.774635
    3 50% Assyrians +25% Congo-pygmies +25% Ust_Ishim @ 7.373574
    4 50% Assyrians +25% Mbuti.DG +25% Ust_Ishim @ 7.373574
    5 50% Druze +25% Congo-pygmies +25% Kshatriya @ 7.412453
    6 50% Druze +25% Kshatriya +25% Mbuti.DG @ 7.412453
    7 50% Druze +25% Brahmin +25% Congo-pygmies @ 7.496037
    8 50% Druze +25% Brahmin +25% Mbuti.DG @ 7.496037
    9 50% Arabs_Israel +25% Congo-pygmies +25% Nepali_Brahmin @ 8.093916
    10 50% Arabs_Israel +25% Mbuti.DG +25% Nepali_Brahmin @ 8.093916
    11 50% Arabs_Israel +25% Brahmin +25% Congo-pygmies @ 8.209755
    12 50% Arabs_Israel +25% Brahmin +25% Mbuti.DG @ 8.209755
    13 50% Arabs_Israel +25% Congo-pygmies +25% Kshatriya @ 8.297229
    14 50% Arabs_Israel +25% Kshatriya +25% Mbuti.DG @ 8.297229
    15 50% Druze +25% Congo-pygmies +25% Punjab @ 9.422318
    16 50% Druze +25% Mbuti.DG +25% Punjab @ 9.422318
    17 50% Druze +25% Congo-pygmies +25% India_Marwadi @ 9.741996
    18 50% Druze +25% India_Marwadi +25% Mbuti.DG @ 9.741996
    19 50% Assyrians +25% Bengali_Dhaka +25% Congo-pygmies @ 9.920114
    20 50% Assyrians +25% Bengali_Dhaka +25% Mbuti.DG @ 9.920114
    453398 iterations.

    Using 4 populations approximation:
    1 Azerbaijanis+Congo-pygmies+Druze+Ust_Ishim @ 5.346899
    2 Azerbaijanis+Druze+Mbuti.DG+Ust_Ishim @ 5.346899
    3 Arabs_Israel+Azerbaijanis+Congo-pygmies+Ust_Ishim @ 5.909369
    4 Arabs_Israel+Azerbaijanis+Mbuti.DG+Ust_Ishim @ 5.909369
    5 Arabs_Israel+Congo-pygmies+Iran_Zoroastrian+Ust_Ishim @ 6.094019
    6 Arabs_Israel+Iran_Zoroastrian+Mbuti.DG+Ust_Ishim @ 6.094019
    7 Congo-pygmies+Druze+Iran_Zoroastrian+Ust_Ishim @ 6.600187
    8 Druze+Iran_Zoroastrian+Mbuti.DG+Ust_Ishim @ 6.600187
    9 Congo-pygmies+Druze+Druze+Nepali_Brahmin @ 6.774635
    10 Druze+Druze+Mbuti.DG+Nepali_Brahmin @ 6.774635
    11 Assyrians+Azerbaijanis+Congo-pygmies+Ust_Ishim @ 6.851397
    12 Assyrians+Azerbaijanis+Mbuti.DG+Ust_Ishim @ 6.851397
    13 Congo-pygmies+Druze+North-Ossetians+Ust_Ishim @ 7.155663
    14 Druze+Mbuti.DG+North-Ossetians+Ust_Ishim @ 7.155663
    15 Arabs_Israel+Assyrians+Congo-pygmies+Nepali_Brahmin @ 7.172996
    16 Arabs_Israel+Assyrians+Mbuti.DG+Nepali_Brahmin @ 7.172996
    17 Arabs_Israel+Congo-pygmies+Druze+Nepali_Brahmin @ 7.260253
    18 Arabs_Israel+Druze+Mbuti.DG+Nepali_Brahmin @ 7.260253
    19 Congo-pygmies+Druze+Georgians+Ust_Ishim @ 7.348677
    20 Druze+Georgians+Mbuti.DG+Ust_Ishim @ 7.348677
    21 Circassians+Congo-pygmies+Druze+Ust_Ishim @ 7.356114
    22 Circassians+Druze+Mbuti.DG+Ust_Ishim @ 7.356114
    23 Assyrians+Assyrians+Congo-pygmies+Ust_Ishim @ 7.373574
    24 Assyrians+Assyrians+Mbuti.DG+Ust_Ishim @ 7.373574
    25 Assyrians+Congo-pygmies+Druze+Nepali_Brahmin @ 7.397128
    26 Assyrians+Druze+Mbuti.DG+Nepali_Brahmin @ 7.397128
    27 Congo-pygmies+Druze+Russia_Kabardins+Ust_Ishim @ 7.406886
    28 Druze+Mbuti.DG+Russia_Kabardins+Ust_Ishim @ 7.406886
    29 Congo-pygmies+Druze+Druze+Kshatriya @ 7.412453
    30 Druze+Druze+Kshatriya+Mbuti.DG @ 7.412453
    31 Brahmin+Congo-pygmies+Druze+Druze @ 7.496037
    32 Brahmin+Druze+Druze+Mbuti.DG @ 7.496037
    33 Arabs_Israel+Congo-pygmies+North-Ossetians+Ust_Ishim @ 7.563645
    34 Arabs_Israel+Mbuti.DG+North-Ossetians+Ust_Ishim @ 7.563645
    35 Arabs_Israel+Congo-pygmies+Iranians+Ust_Ishim @ 7.56439
    36 Arabs_Israel+Iranians+Mbuti.DG+Ust_Ishim @ 7.56439
    37 Congo-pygmies+Druze+Iranians+Ust_Ishim @ 7.571318
    38 Druze+Iranians+Mbuti.DG+Ust_Ishim @ 7.571318
    39 Arabs_Israel+Assyrians+Brahmin+Congo-pygmies @ 7.647029
    40 Arabs_Israel+Assyrians+Brahmin+Mbuti.DG @ 7.647029
    888825 iterations.

  10. The Following User Says Thank You to Deftextra For This Useful Post:

     tippy (10-12-2016)

  11. #137
    Gold Member Class
    Posts
    1,077
    Sex
    Location
    USA-NC
    Ethnicity
    Caucasian
    Nationality
    USA
    Y-DNA
    R1b-Z2961>ZZ30>ZP106
    mtDNA
    K1a4a1c-T199C

    United States of America United States Tree Flag Bermuda United Kingdom France Italy
    Quote Originally Posted by Deftextra View Post
    AncestryDNA converted to 23andMe

    (0.594276 genotype rate)

    15.42% Pashtun
    11.81% SE_European
    1.40% Brunei
    3.60% Burmese
    0.37% NE_European
    2.02% NW_European
    11.56% Indian
    27.79% SSA
    0.70% Mongolian
    1.16% Papuan
    0.02% NE_Asian
    22.76% Near_Eastern
    1.39% Turkic

    My SSA score is slightly lower than what I usually score (around 32%), but I think this is because of the low genotype rate and lots of snp's are missing?
    I suspect some of your SSA is harbored in the Near-Eastern component. [One of its proxies was Saudi.]
    dp :-)
    Grace and good eure and long prosperitee. [Lydg. Mum. Goldsmiths]

    ysearch/mitosearch id: atr94 GENBANK/ENA mtDNA id: KF703542 member ISOGG

  12. The Following User Says Thank You to dp For This Useful Post:

     Deftextra (10-28-2016)

  13. #138
    Junior Member
    Posts
    19
    Sex
    Location
    Savaii, Samoa
    Ethnicity
    Samoan and Han/Manchu
    Nationality
    Samoa
    Y-DNA
    O3a3c (Father)
    mtDNA
    B4a1a1

    Samoa Hong Kong
    Thanks Mughals, greetings from the Qing Dynasty

    13 ancestral populations
    357637 total SNPs
    0 flipped SNPs
    102127 heterozygous SNPs
    1619 no-calls
    0 absent SNPs
    0.995473 genotype rate
    mode genomewide

    1619 SNPs missing (no-call or absent)

    5410 total iterations
    9.997E-08 final dQ

    ----------------------------
    FINAL ADMIXTURE PROPORTIONS:
    ----------------------------

    0.38% Pashtun
    0.40% SE_European
    49.86% Brunei
    22.52% Burmese
    0.11% NE_European
    0.07% NW_European
    1.48% Indian
    0.11% SSA
    8.29% Mongolian
    14.91% Papuan
    1.06% NE_Asian
    0.07% Near_Eastern
    0.72% Turkic

  14. The Following 2 Users Say Thank You to Exosuits For This Useful Post:

     dp (02-13-2017), Varun R (02-12-2017)

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